[ARROW-17748] not able to install arrow on alpine 3.16 - ASF JIRA

Details

Type: Bug
Status: Open
Priority: Critical
Resolution: Unresolved
Affects Version/s: 9.0.0
Fix Version/s: None
Component/s: Integration
Labels:
None

External issue URL:
https://github.com/apache/arrow/issues/32981

Description

Hi we're facing an issue with integration on the latest version on alpine, it seems that the root cause is placed on arrow package.

We've tested a few of version and we're able to install only arrow in version 3.0.0

It's seems that this package is not compatible

this is a dockerfile which we're using for

//this image python:3.16-alpine has been created from the scratch

FROM python:3.16-alpine

RUN apk update \
    && apk upgrade \
    && apk add --no-cache build-base \
        autoconf \
        bash \
        bison \
        boost-dev \
        cmake \
        flex \
        libressl-dev \
        zlib-dev

RUN pip install --no-cache-dir six pytest numpy cython
RUN pip install --no-cache-dir pandas

ARG ARROW_VERSION=9.0.0
ARG ARROW_BUILD_TYPE=release

ENV ARROW_HOME=/usr/local \
    PARQUET_HOME=/usr/local

#Download and build apache-arrow
RUN mkdir /arrow \
    && wget -q https://github.com/apache/arrow/archive/apache-arrow-${ARROW_VERSION}.tar.gz -O /tmp/apache-arrow.tar.gz \
    && tar -xvf /tmp/apache-arrow.tar.gz -C /arrow --strip-components 1 \
    && mkdir -p /arrow/cpp/build \
    && cd /arrow/cpp/build \
    && cmake -DCMAKE_BUILD_TYPE=$ARROW_BUILD_TYPE \
        -DOPENSSL_ROOT_DIR=/usr/local/ssl \
        -DCMAKE_INSTALL_LIBDIR=lib \
        -DCMAKE_INSTALL_PREFIX=$ARROW_HOME \
        -DARROW_WITH_BZ2=ON \
        -DARROW_WITH_ZLIB=ON \
        -DARROW_WITH_ZSTD=ON \
        -DARROW_WITH_LZ4=ON \
        -DARROW_WITH_SNAPPY=ON \
        -DARROW_PARQUET=ON \
        -DARROW_PYTHON=ON \
        -DARROW_PLASMA=ON \
        -DARROW_BUILD_TESTS=OFF \
        .. \
    && make -j$(nproc) \
    && make install \
    && cd /arrow/python \
    && python setup.py build_ext --build-type=$ARROW_BUILD_TYPE --with-parquet \
    && python setup.py install \
    && rm -rf /arrow /tmp/apache-arrow.tar.gz

link to describe a bug

https://gist.github.com/bskaggs/fc3c8d0d553be54e2645616236fdc8c6

and the final output of error. Please double check and release the fix.

#12 164.8 -- stderr output is:
#12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSocket.cpp:37:
#12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
#12 164.8     1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
#12 164.8       |  ^~~~~~~
#12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TServerSocket.cpp:33:
#12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
#12 164.8     1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
#12 164.8       |  ^~~~~~~
#12 164.8 In file included from /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:34:
#12 164.8 /usr/include/sys/poll.h:1:2: warning: #warning redirecting incorrect #include <sys/poll.h> to <poll.h> [-Wcpp]
#12 164.8     1 | #warning redirecting incorrect #include <sys/poll.h> to <poll.h>
#12 164.8       |  ^~~~~~~
#12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp: In function 'void apache::thrift::transport::cleanupOpenSSL()':
#12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:157:3: error: 'OPENSSL_thread_stop' was not declared in this scope; did you mean 'OPENSSL_realloc'?
#12 164.8   157 |   OPENSSL_thread_stop();
#12 164.8       |   ^~~~~~~~~~~~~~~~~~~
#12 164.8       |   OPENSSL_realloc
#12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp: In member function 'virtual void apache::thrift::transport::TSSLSocket::close()':
#12 164.8 /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep/lib/cpp/src/thrift/transport/TSSLSocket.cpp:395:5: error: 'OPENSSL_thread_stop' was not declared in this scope; did you mean 'OPENSSL_realloc'?
#12 164.8   395 |     OPENSSL_thread_stop();
#12 164.8       |     ^~~~~~~~~~~~~~~~~~~
#12 164.8       |     OPENSSL_realloc
#12 164.8 make[5]: *** [lib/cpp/CMakeFiles/thrift.dir/build.make:566: lib/cpp/CMakeFiles/thrift.dir/src/thrift/transport/TSSLSocket.cpp.o] Error 1
#12 164.8 make[5]: *** Waiting for unfinished jobs....
#12 164.8 make[4]: *** [CMakeFiles/Makefile2:125: lib/cpp/CMakeFiles/thrift.dir/all] Error 2
#12 164.8 make[3]: *** [Makefile:156: all] Error 2
#12 164.8
#12 164.8 CMake Error at /arrow/cpp/build/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-RELEASE.cmake:47 (message):
#12 164.8   Stopping after outputting logs.
#12 164.8
#12 164.8
#12 164.8 make[2]: *** [CMakeFiles/thrift_ep.dir/build.make:86: thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build] Error 1
#12 164.8 make[1]: *** [CMakeFiles/Makefile2:940: CMakeFiles/thrift_ep.dir/all] Error 2
#12 164.8 make[1]: *** Waiting for unfinished jobs....
#12 187.8 -- re2_ep build command succeeded.  See also /arrow/cpp/build/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-*.log
#12 187.8 [ 20%] Performing install step for 're2_ep'
#12 188.7 -- re2_ep install command succeeded.  See also /arrow/cpp/build/re2_ep-prefix/src/re2_ep-stamp/re2_ep-install-*.log
#12 188.7 [ 20%] Completed 're2_ep'
#12 188.7 [ 20%] Built target re2_ep
#12 212.4 -- jemalloc_ep build command succeeded.  See also /arrow/cpp/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-build-*.log
#12 212.4 [ 20%] Performing install step for 'jemalloc_ep'
#12 212.5 -- jemalloc_ep install command succeeded.  See also /arrow/cpp/build/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-install-*.log
#12 212.5 [ 20%] Completed 'jemalloc_ep'
#12 212.5 [ 20%] Built target jemalloc_ep
#12 212.5 make: *** [Makefile:146: all] Error 2
------
executor failed running [/bin/sh -c mkdir /arrow     && wget -q https://github.com/apache/arrow/archive/apache-arrow-${ARROW_VERSION}.tar.gz -O /tmp/apache-arrow.tar.gz     && tar -xvf /tmp/apache-arrow.tar.gz -C /arrow --strip-components 1     && mkdir -p /arrow/cpp/build     && cd /arrow/cpp/build     && cmake -DCMAKE_BUILD_TYPE=$ARROW_BUILD_TYPE         -DOPENSSL_ROOT_DIR=/usr/local/ssl         -DCMAKE_INSTALL_LIBDIR=lib         -DCMAKE_INSTALL_PREFIX=$ARROW_HOME         -DARROW_WITH_BZ2=ON         -DARROW_WITH_ZLIB=ON         -DARROW_WITH_ZSTD=ON         -DARROW_WITH_LZ4=ON         -DARROW_WITH_SNAPPY=ON         -DARROW_PARQUET=ON         -DARROW_PYTHON=ON         -DARROW_PLASMA=ON         -DARROW_BUILD_TESTS=OFF         ..     && make -j$(nproc)     && make install     && cd /arrow/python     && python setup.py build_ext --build-type=$ARROW_BUILD_TYPE --with-parquet     && python setup.py install     && rm -rf /arrow /tmp/apache-arrow.tar.gz]: exit code: 2

not able to install arrow on alpine 3.16

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