Details
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Bug
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Status: Closed
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Major
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Resolution: Fixed
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None
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None
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Ubuntu 16.04 running Docker. Running stain/jena-fuseki from the official Docker Hub.
Description
Attempting to backup through Fuseki, TDB 500M+ triples, breaking with error:
[2018-06-01 13:25:46] Log4jLoggerAdapter WARN Exception in backup org.apache.jena.atlas.RuntimeIOException: java.io.IOException: Illegal UTF-8: 0xFFFFFFB1 at org.apache.jena.atlas.io.IO.exception(IO.java:233) at org.apache.jena.atlas.io.BlockUTF8.exception(BlockUTF8.java:275) at org.apache.jena.atlas.io.BlockUTF8.toCharsBuffer(BlockUTF8.java:150) at org.apache.jena.atlas.io.BlockUTF8.toChars(BlockUTF8.java:73) at org.apache.jena.atlas.io.BlockUTF8.toString(BlockUTF8.java:95) at org.apache.jena.tdb.store.nodetable.NodecSSE.decode(NodecSSE.java:101) at org.apache.jena.tdb.lib.NodeLib.decode(NodeLib.java:105) at org.apache.jena.tdb.lib.NodeLib.fetchDecode(NodeLib.java:81) at org.apache.jena.tdb.store.nodetable.NodeTableNative.readNodeFromTable(NodeTableNative.java:186) at org.apache.jena.tdb.store.nodetable.NodeTableNative._retrieveNodeByNodeId(NodeTableNative.java:111) at org.apache.jena.tdb.store.nodetable.NodeTableNative.getNodeForNodeId(NodeTableNative.java:70) at org.apache.jena.tdb.store.nodetable.NodeTableCache._retrieveNodeByNodeId(NodeTableCache.java:128) at org.apache.jena.tdb.store.nodetable.NodeTableCache.getNodeForNodeId(NodeTableCache.java:82) at org.apache.jena.tdb.store.nodetable.NodeTableWrapper.getNodeForNodeId(NodeTableWrapper.java:50) at org.apache.jena.tdb.store.nodetable.NodeTableInline.getNodeForNodeId(NodeTableInline.java:67) at org.apache.jena.tdb.lib.TupleLib.triple(TupleLib.java:107) at org.apache.jena.tdb.lib.TupleLib.triple(TupleLib.java:84) at org.apache.jena.tdb.lib.TupleLib.lambda$convertToTriples$2(TupleLib.java:54) at org.apache.jena.atlas.iterator.Iter$2.next(Iter.java:270) at org.apache.jena.atlas.iterator.Iter$2.next(Iter.java:270) at org.apache.jena.atlas.iterator.Iter.next(Iter.java:891) at org.apache.jena.riot.system.StreamOps.sendQuadsToStream(StreamOps.java:140) at org.apache.jena.riot.writer.NQuadsWriter.write$(NQuadsWriter.java:62) at org.apache.jena.riot.writer.NQuadsWriter.write(NQuadsWriter.java:45) at org.apache.jena.riot.writer.NQuadsWriter.write(NQuadsWriter.java:91) at org.apache.jena.riot.RDFWriter.write$(RDFWriter.java:208) at org.apache.jena.riot.RDFWriter.output(RDFWriter.java:165) at org.apache.jena.riot.RDFWriter.output(RDFWriter.java:112) at org.apache.jena.riot.RDFWriterBuilder.output(RDFWriterBuilder.java:149) at org.apache.jena.riot.RDFDataMgr.write$(RDFDataMgr.java:1269) at org.apache.jena.riot.RDFDataMgr.write(RDFDataMgr.java:1162) at org.apache.jena.riot.RDFDataMgr.write(RDFDataMgr.java:1153) at org.apache.jena.fuseki.mgt.Backup.backup(Backup.java:115) at org.apache.jena.fuseki.mgt.Backup.backup(Backup.java:75) at org.apache.jena.fuseki.mgt.ActionBackup$BackupTask.run(ActionBackup.java:58) at org.apache.jena.fuseki.async.AsyncPool.lambda$submit$0(AsyncPool.java:55) at org.apache.jena.fuseki.async.AsyncTask.call(AsyncTask.java:100) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617) at java.lang.Thread.run(Thread.java:745) Caused by: java.io.IOException: Illegal UTF-8: 0xFFFFFFB1 ... 40 more [2018-06-01 13:25:46] Log4jLoggerAdapter INFO Backup(/fuseki/backups/PDE_PROD_2018-06-01_13-24-00):2
Attachments
Issue Links
- duplicates
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JENA-1522 Unable to consistently retrieve data from large dataset
- Closed